CDS

Accession Number TCMCG077C23063
gbkey CDS
Protein Id KAF5748319.1
Location join(1897403..1897475,1897561..1897724,1898341..1898437,1898926..1899052,1899165..1899280,1899454..1899551,1899631..1899782,1899991..1900048,1900147..1900254,1901061..1901313,1901980..1902164,1903095..1903187,1903906..1904004,1904549..1904680,1904768..1904812,1904905..1905072,1905613..1905687,1905806..1905907)
Organism Tripterygium wilfordii
locus_tag HS088_TW04G00271

Protein

Length 714aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000004.1
Definition cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Tripterygium wilfordii]
Locus_tag HS088_TW04G00271

EGGNOG-MAPPER Annotation

COG_category A
Description Cleavage and polyadenylation specificity factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14402        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005847        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTCAACTTCTTGCTCGACTGCGGTTGGAATGACCACTTTGATCCTTCCCTACTTCAACCACTGTCCAGCTTCGACTGTAGATGCTGTTTTACTGTCGCATCCCGATACGCTACACCTTGGTGCTTTGCCGTATGCCATGAAAAATCTCGGACTCTCTGCTCCAGTGTACTCGACAGAGCCAGTGCATAGAATGGGACTTCTCACCATGTACGATCAATATCTGTCACGGAAGGCAATGTCAGAGTTCGATTTGTTTACTTTGGATGATATTGATTCTGCTTTTCAAATTGTGACCAGGCTAACATTCTCTCAGAATCATCATCTGTCTGGAAAAGGAGAGGGTATTGTGATTGCTCCTCATGTTGCCGGCCATCTATTGGGAGGTACCATCTGGAAAATAACAAAGGATGGAGAAGATGTTATATATGCTGTTGACTTCAACCACCGGAAAGAGAGGCATTTGAATGGAACTGTTCTAAATTCTTTTGTCCGGCCCGCTGTTTTAATTACTGATGCCTATAATGCTCTGAACAATCAGCCTTTAGCACGGCATAGAGAAAAAGAAATTCTAGAGAATACTATTGTAAAGGCTCTAGAAGCTGGTGGAAATGTGCTGCTACCCGTCGATACTGCTGGGCGAGTGTTGGAACTTGTTCTAATATTAGAACAGTTCTGGGCACAACGCCTCTTAAATTATCCCATCTTGTTCCTCACTTACGTCACAACAAGCACGATTGATTACGTCAAGAGTTTCCTGGAGTGGATGAGTGACTCCATTGCTAAGTCTTTTGAAACTACACGTGACAATGCTTTTCTTCTGAAGCATGTCAGACTTCTAATTAACAAGAGTGAACTTGATAATGCTCCAGTTGGCCCAAAGGTTGTTCTAGCATCCATGGCTAGTTTGGAAGCTGGTTCTTCTCACGATATATTTGTTGAATGGGCAGCTGATCCGAGAAACCTTGTGCTTTTCACTGAAAGAGCGCAGTTTGGCACCCTAGCTCGCATGCTTCAGGCAGATCCACCTCCAAAAGCTGTTAAAGTAACCATGTCTAAGAGGGTTCCTTTGGTTGGGGAGGAGTTGTTTGCCTACGAAGAAGAGCAAGAGCGATTGAGAAAAGAAGAAGCTCTAAAAGCTAGTCTCATCAAAGAGGAGGAGGCAAAAGCTTCCCACATACCTGACAATAATATGAGTGATCCAATGGTTATTGATGCTGGCAATGCACATACTTCATTGGATGCGGCTGGTTCACAAGGGGGCAGACATTGGGACATATTAATCGATGGATTTGTTCCTCCACCCACCAGTGTCGCTCCAATGTTTCCTTTCTATGAGAATGTGTCTGATTGGGATGACTTTGGGGAAGTCATAAATCCTGATGATTATGTGATCAAGGAAGAAGACATGGACCAATCAGCAATGACTATTGGTGGGGATATGGATGGAAAGCTTGATGAAGGATCTGCTAGTTTAATACTTGATACAAAGCCTTCAAAAGTCGTGTCCAGTGAGTTAACTGTGCAAGTGAAGTGTTCATTGATTTATGTGGACTATGAGGGTCGTTCTGATGGTCGCTCAGTCAAATCAATTCTTGCCCATGTGGCTCCTCTAAAACTTGTTTTGGTGCATGGATCTGCGGAGGCCACAGAGCATCTTAGGCAGCATTGCATGAAGCAAGTGTGTCCTCACGTTTATGCTCCTCAAATTGAAGAAACAATTGATGTAACATCTGATTTGTGTGCTTATAAGGTGCAACTTTCTGAGAAGCTGATGAGCAATGTGCTCTTTAAGAAGTTAGGAGAGTACGAGATAGCTTGGGTTGATGCTGACGTAGGGAAGACTGAGAACGGCATGCTGTCTATACTACCCATATCAGCCCCTGCTCCACCACATAGTTCCGTCCTTGTTGGTGATCTAAAACTGGCTGATTTCAAGCAGTTTCTTTCTGGCAAGGGTGTCCAGGTTGAATTTGCTGGTGGTGCACTGCGATGTGGGGAGTATGTGACACTACGCAAGGTTGGGCATGGAAGCCAGAAGGGTGGAGGATCTGGTACTCAGCAGATTGTGATTGAAGGCCCGCTCTGTGAGGATTATTATATGATTAGAGACTATTTGTATTCACAATTCTATCTGCTTTAA
Protein:  
MASTSCSTAVGMTTLILPYFNHCPASTVDAVLLSHPDTLHLGALPYAMKNLGLSAPVYSTEPVHRMGLLTMYDQYLSRKAMSEFDLFTLDDIDSAFQIVTRLTFSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERHLNGTVLNSFVRPAVLITDAYNALNNQPLARHREKEILENTIVKALEAGGNVLLPVDTAGRVLELVLILEQFWAQRLLNYPILFLTYVTTSTIDYVKSFLEWMSDSIAKSFETTRDNAFLLKHVRLLINKSELDNAPVGPKVVLASMASLEAGSSHDIFVEWAADPRNLVLFTERAQFGTLARMLQADPPPKAVKVTMSKRVPLVGEELFAYEEEQERLRKEEALKASLIKEEEAKASHIPDNNMSDPMVIDAGNAHTSLDAAGSQGGRHWDILIDGFVPPPTSVAPMFPFYENVSDWDDFGEVINPDDYVIKEEDMDQSAMTIGGDMDGKLDEGSASLILDTKPSKVVSSELTVQVKCSLIYVDYEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLRQHCMKQVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEIAWVDADVGKTENGMLSILPISAPAPPHSSVLVGDLKLADFKQFLSGKGVQVEFAGGALRCGEYVTLRKVGHGSQKGGGSGTQQIVIEGPLCEDYYMIRDYLYSQFYLL